FASTQ, BAM, and VCF file formats easily explained - A must watch if you have had a DNA test

FASTQ, BAM, and VCF file formats easily explained - A must watch if you have had a DNA test

Katharine ME

2 года назад

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@miguelarellano5260
@miguelarellano5260 - 27.09.2023 03:31

Thank you so much Katharine! you saved a biotech eng. student from Mexico! 🇲🇽

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@eduardofernandezdelpeloso8663
@eduardofernandezdelpeloso8663 - 08.07.2023 17:40

Nice video!
do you know any software tool

I can use to compare the results of full genome

sequencing from two different companies?

I have bought tests from Dante and Nebula, and once

I get the results I would like to be able to compare them

and do some statistical analysis of the differences.

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@TimoHromadka
@TimoHromadka - 08.06.2023 15:08

Great video, helped me disambiguate many concepts!

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@carlloeber
@carlloeber - 14.05.2023 21:08

You are amazing..

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@lolisimon2933
@lolisimon2933 - 09.04.2023 16:27

Awesome video
But Im not too sure about your explanation of genome coverage
Your explanation for it sounded more like read depth

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@markcuello5
@markcuello5 - 19.03.2023 21:00

HELP

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@sinaisbitt
@sinaisbitt - 31.01.2023 12:50

Some great explanations in your videos. I'm really curious as to what we can do with the data once we get it. Right at the end of this video, you mentioned a video that would explain some of this. Do you still plan to make this?

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@e3.s.nro2tan75
@e3.s.nro2tan75 - 26.01.2023 08:09

30 times coverage or 100 times coverage is better? Which is better on accuracy? Is 100x an over do or it is necessary to reduce the error margin?

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@user-kj9pg6ht1q
@user-kj9pg6ht1q - 24.01.2023 04:00

Thank you for your information, I have a question : in exam they ask always what's the difference between FastQ and Bam file, what is the best short answer for this question?

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@gerardmingarro6788
@gerardmingarro6788 - 14.12.2022 22:00

excellent video!

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@spicesmiles
@spicesmiles - 07.12.2022 21:04

Amazing! Succinct! Thank you!!!!

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@mst63th
@mst63th - 01.11.2022 19:55

Thanks, you make it easy to understand. Keep going.

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@kaoulkae
@kaoulkae - 08.10.2022 12:31

This was very helpful and very well explained. You are talented 🙂

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@oksana03fel
@oksana03fel - 05.10.2022 21:16

Very clear video. Thank you.
Katherine, could you please explain how to convert .fastq files to .vsf. Thank you

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@sanakhawer693
@sanakhawer693 - 05.10.2022 08:10

super helpful thank you so much.... please do a video on how to use different softwares

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@iamadityavaishy
@iamadityavaishy - 13.09.2022 15:41

Thank you so much. You explained all this so easily 🤗🤩

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@deepchanda244
@deepchanda244 - 30.08.2022 21:05

Awesome explanation... can you please tell how vcf file will look like if the segment from mother and father both have different nucleotide from that of reference?

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@md.mohiuddinmasum3632
@md.mohiuddinmasum3632 - 30.08.2022 08:15

Simple and amazing explanation.
This video deserves more views.

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@saud319
@saud319 - 28.08.2022 01:04

So the company I tested with gave me these files but none of them is transferable to the famous ancestry data bases. Is there a way to convert them?

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@shawnmcmurtrey8090
@shawnmcmurtrey8090 - 23.07.2022 02:41

Very good explanations!! Looking forward to watching more of your videos!

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@programmer5350
@programmer5350 - 07.07.2022 01:38

Awesome high quality bioinformatics video! We need more of these :)

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@mohamedesmailelsalahaty6050
@mohamedesmailelsalahaty6050 - 06.07.2022 19:05

Great go on

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@kikiarev
@kikiarev - 23.06.2022 08:17

Thank you for the explanation! It's really confusing at first glance!

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@KatharineME
@KatharineME - 07.06.2022 21:51

The CRAM file format is simply a newer and more compressed version of the BAM file format, for anyone who was wondering that :)

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